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Run `make doc` for the building. Then `make install` will install the
generated documentation.
- Move Doxyfile to Doxyfile.in, put CMAKE_CURRENT_SOURCE_DIR into it.
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- updated Doxyfile
- added/changed file, dir and namespace descriptions
- fixed some errors in doxygen tags
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- moved mainpage src/doc/docmain.doc.txt to src/app/main.cpp
- removed old modfile modules from src/common
- removed Snd namespace in engine.h
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Basic functions finished and tested for matrix and vector.
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* added docmain.doc.txt with Doxygen \mainpage
* fixed paths in Doxyfile
* disabled some graph generation (for now)
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